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RadTech

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In Depth Review: EndNote 4 (with notes on working with a Palm and FileMaker)

©2001 David Schultz


(Navigate this review with these anchor links.)


Introduction

Thankfully, I am not now writing a dissertation! But I have written a lot in my academic career, though nothing like I did when in graduate school. I like the research, I like the learning that goes with it, and I love to write. But I am not one with a lot of patience when it comes to the details of the craft, details of form which take away from the content. One such nasty little detail in academic research is citations in a paper. Sometimes, even within one discipline, different journals have different formats for endnotes, footnotes, parenthetical references and so on. On top of teaching it is hard to keep these straight in my scatterbrained little professorial head!

Then there is finding reference works, books, and articles in the first place. Run to the library, look on the computers, which i shit-and-miss at best. If the library has it, great. If not, a wasted trip to the campus. Many campuses have net access and that helps, but it only gives you availability in most cases.

Finally, there is my library. I have roughly well over 3000 books in my study, mostly philosophy, but the collection ranges from ancient history, to mathematics and physics, and theology. I want to keep track of them; and I want to catalog them for insurance purposes as well (books are expensive!!). The best way is to put them into a database. As a Mac user I have FileMakerPro (or Excel even) which I could use. But putting in references for over 3000 books by hand?! I'd rather spend time with students and other philosophers.

EndNote 4 is a program which would have made my graduate school experiences much better (if that is possible!). It can handle all three of the scenarios mentioned above. And with its Internet connectivity it is even more powerful and useful. It can save busy teachers time and effort that can be used for more important things like actual research, class preparation, and spending time with students.

In a nutshell, before I get to details, here is what EndNote 4 can do for you: foot- and end-note tool from within Word, bibliography management, books database (see below for working with FileMakerPro and for working with EndNote and a Palm), and reference Internet search tool — all-in-one! Moreover, it doesn't only work with Word. Word uses the EndNote Add-In, but you can, with a little more effort, work with it in WordPerfect, Appleworks, Nisus, and FileMakerPro. It can export as RTF and HTML even.


Installation and Working with the Word Add-In

Installation is easy. But be careful. EndNote installs the application itself and an "EndNote Word Add-in." The add-in goes into the Office/Startup/Word directory. Make sure it is in this directory. Once you start up Word after installation you go the "Tools" menu where you find several new commands, such as "Go To EndNote," "Insert Citation(s)," and "Format Bibliography."

To begin, start EndNote and open a Library (the term for a database of reference sources). This Library will be the database EndNote uses to insert citations into a paper. Then start Word and begin writing. When you come to a citation, go to the "Tools" menu and choose "Insert Citation(s)." But make sure you have a particular reference source selected, for EndNote will place the currently selected reference source at the point in the paper where your cursor is.


An EndNote Library File on the desktop. Make backups -- single data files can become corrupted easily.

EndNote puts a placeholder, a temporary citation in your paper. It is the author, date and reference number from the Library. For example, it will place [Kierkegaard, 1978, #4] as a temporary citation. This is nice in that it does not clutter your paper, but it is limiting. Right now one cannot change these fields, and this causes problems when several authors with different Libraries are collaborating on a paper. A bit more flexibility in the placeholders would be nice.

Now, make sure you have the proper citation style set in the EndNote application. It comes with some 500 styles to choose from, and you can find others at the developer's site, and there is a lively Mailing List on which you can ask if others have a style you need. Also, you can create custom styles right from within EndNote itself in its Style Editor. APA styles, to almost any journal you can name, and of course the Chicago 14A and 14B and Turabian Styles are included. (There are not many styles for my area, philosophy, but most of these journals use Chicago or Turabian anyway.) All those nasty details I said I can't keep straight? Well, now I don't have to — EndNote does it for me. The Styles in EndNote are a godsend for scholars writing to several journals.



The Styles Manager. With over 500, and more always available, your citations are styled quickly and neatly.

After you have placed all the citations in the paper, simply go to the "Tools" menu again and select ""Format Bibliography." Right before your very eyes you paper now has a formatted bibliography using the default style you have chosen. The bibliography is placed as the last element in the paper, but you can move it and cut-n-past it to a different location in the paper or book if you desire. Details, details, and little niceties -- that's what makes a nice program. You can download hundreds of styles here.


The Toolbar in the EndNote application itself.



Selecting styles from the Toolbar gives you your style favorites checked from the Styles Manager. Styles also determine output formats.

To work with footnotes and endnotes instead of, say, parenthetical references within the paper, there are certain steps you have to follow. Basically it is this simple: Write your content, go to "Add Footnote" under the "Insert" menu in Word, add the footnote. Go to the footnote itself and then select the "Insert Citation(s)" from the "Tools" menu. Again, sit back and watch as your paper has been formatted with the correct styles in the footnotes themselves. And then get up and do something fun because you just saved hours of work!

There is another way to set up bibliographies. You can choose the "Scan" paper command and have EndNote, well, scan a paper for references and create a bibliography, with footnotes, or whatever format you use. This is even more useful for when you have several papers with references and citations which form one work. You can choose the same command and it will scan the paper, then change to "Scan Next" which will scan the next paper. Finally, it will place a cumulative bibliography at the end of the last paper. Very handy for authors writing books in separate documents containing separate chapters.

You can search any Library you produce. The search feature is nice and clean, and it gives you several ways to set up criteria. This is the Search window for a local Library:

It uses standard Boolean operators, you can match case, field and other parameters as well. When you go to the "Field Menu" ("Author" in the above picture), you a a large list of choices.


Work with AppleWorks and Other Programs

The process for working in other applications is bit more lengthy, but again the time saving is worth it. Start AppleWorks and EndNote and start writing. When you come to a reference you switch to EndNote and copy the reference you want to place at the current position in the paper. Go back to AppleWorks and paste in the reference to create a temporary citation. You can also drag-n-drop references too. For multiple works in one citation just drag or copy-paste two references items.

To generate the bibliography go back to EndNote and choose "Scan Paper" and EndNote will scan the paper. Basically what is going on is that EndNote is comparing the temporary citation with the Library and parsing the match with the styles you have selected. You just work directly from the EndNote application instead of the Add-in.

If you want an "Independent Bibliography," one not associated with a paper, say to hand out to students and colleagues, simply open a Library, hold "Option" and drag to an open document. EndNote does the rest, using the Style you have selected to place a reference in the document.

This citation insertion, with hundreds of styles available, and bibliography creator, alone are worth the price in terms of time saved for busy scholars. Believe me it works. It is not without its problems (see below) but making small corrections is less time consuming than doing all the footnotes and bibliographies by hand.


Connectivity: Gathering Reference Libraries from the Internet


Selecting your Connection Files

Without doubt one of the "coolest" features, to speak as my students do, is EndNote's use of the Internet to connect you to hundreds of libraries across the world. You can sit in the comfort of your home study and gather every book ever on written on Kierkegaard, have them downloaded, and new Library created right on your desktop. EndNote 4 comes with over 100 "connection" files for this, including the Library of Congress, Cornell University, MEDLINE, and many, many others. Amazingly, I found our local university in the connection files. So I log on from home, do my search, the results are all neatly put into a Library ready for use in a paper or database. The process works well (remember though that you are working with mostly university library servers that can be very slow or fail to connect at times). ISI is always updating the number of "Connection Files" you can use. Look here for the latest Connection Files. The manual includes a chapter on maing your own connection as well. [Note: Some have reported problems with the Library Congress Connection File, but the latest one should work.]


The Search Criteria window when working with remote databases.

Here is how it works. Go to "File/Connect/Library of Congress" (for instance). A search window (above) comes up to help you define your search by author, years, keywords, ISBN and many other parameters. It will also let you search "Any field." Hit "Perform Search" and EndNote will search then show a window saying "Search Complete," with a field that says "Retrieve Reference 1 to 200," where you select how many references you want to download. The download will begin (again slow but not 56k slow on my cable modem, but it will take several minutes). You now have a database of all the works in the library you connected to. Now that you have it, you can inspect each reference with a handy preview pane. Delete the ones you don't want. Then, just save as an EndNote Library and that's all there is to it.


The results of a database search over the 'Net.

This feature is something I have used very often. I mentioned I have a library in my study. I want to catalog it in FileMaker Pro. So what do I do? I simply connect to a Library and download references for the books I have in my library. I then save a Library and export as tab delimited to open up in FileMaker Pro (which you first set up with all the right fields, but see below). I now have a full database of my home library. When I get a new book I simply connect, search, grab it, and add it to the database.

I cannot tell you how much time this has saved me. In fact (see below) I needed a bibliography on Kierkegaard. I connected to a library server, searched Subject for Kierkegaard, and got over 200 references. It was an easy matter to export the results as a hard copy, formatted bibliography, and, as I will talk about in a moment, export as html for publishing on the web.

We have noticed that sometimes line feeds and strange little entities are carried over into the Library created from a retrieved database. Data files are notorious for being dirty so this might be expected. You can clean these up with text cleaners like TextSpresso, but I had only minimum problems with this. But it does become an issue when you convert your EndNote Library into html (see below).

Again, this feature worth the price alone, even if you never intended to write but simply want to organize your private library or other references for research or personal purposes.

The "Filters" in EndNote do allow you to get clean transfers, up to a limit. There is a large number of them included. And you can create your own. After all, you are dealing with libraries from all over the world and the data you get back is not always consistent. Also, if you are writing for a journal that does not require certain elements in citations, just filter them out (see ic below). The Filters will filter databases and discard any unwanted information or fields, and you can create "Filter Templates" as well. You can download more Filters here.



HTML Export

You can look here for an html bibliography I created from an EndNote Llibrary. I opened a Library, chose "Export/HTML" and EndNote created a "title.htm" file. As I said, line feeds can be a problem and sometimes special characters from foreign language sources fail to translate well. It takes some cleaning up. Moreover, the html it generates is not the best — it is minimal though. It uses VERY simple html with <br> tags between references. So I imported the html EndNote produced into Dreamweaver and added the extra code myself, and cleaned up the spacing and some punctuation. While handy, the html export is not as robust as it could be. But even so, it does an adequate job and again saves time. The lack of code in fact could be a good thing so one can format it the way he wants.


Working with Other Programs: FileMaker Pro and Palm Devices

All of this is very handy. But sometimes you to do more with a Library database. There are two issues here: (1) working with FileMaker Pro and (2) working with EndNote and a Palm devices. Thankfully, both are easy to accomplish, relatively speaking.

Working with FileMaker is easy enough if you just export the Library in a text format, or tab-delimited and such. Set up your FMP database first and get the right fields in place. Export the Library and Import the records into FMP.

But wait, there is more. If you don't want to build a FMP database (or lack the time), then Wooden Brain Concepts has come to the rescue with PocketCites 1.5. It is not the easiest way to get things done but it helps, because it comes with a FMP database all ready built into which you can Import exported Libraries. It also comes with an Export style for EndNote so that the exported file will easily be imported into the database.

Now for for the Palm, there are two ways to get bibliographies into a handheld — either by exporting an EndNote library into a spreadsheet/database, and then transferring it to the Palm, or making a bibliography of references in Word or Appleworks (by the methods described earlier in this review, see "Independent Bibliographies"), and then transferring this document to the Palm in "DOC" format.

If you create your database using FMP, then FMSync ($39) is a must have. FMSync is an application which allows you to sync FMP databases on your Mac to JFile databases on your Palm. It automatically updates fields in synchs. A great program to use with EndNote, FMP for whatever your needs are. We will be looking at this more closely in a later review.

Note: FileMaker has come out with FileMaker Mobile edition. We've had no chance to look at this program yet but it is a third option once you get the Libraries into FMP.


PocketCites and Palm

Back to PocketCites. PocketCites is not just a FMP database: It is a suite of little applications that allow you to work with EndNote on a Palm in a pretty seamless way. EndNote does not support Apple Events, and this limits it. PocketCites gets around this limitation.

As the names implies, it is "PocketCites." The reason is simple: It is used to set up a sync between a Palm device and your local database of references. It requires that you have of JFile ($24), on the Palm, and a copy of FMSync as well. JFile is one of the best database programs for the Palm user with a rich feature set and ease of use. I have used it to keep a grades database updated on my Palm. These two programs are a must have for Palm users with FMP. Anyway ...

The idea is that with the PocketCites EndNote style, you can simply export any or all records you want and the rest is automatic. You can link FM Sync to the import and export scripts in PocketCites, so that when you HotSync not only is the PocketCites database synchronized record by record, but it also (can) automatically create(s) an export file to be imported in EndNote. So in effect you always have a current bibliography on your PDA, and the same bibliography (in a text file) ready to import into EndNote whenever you need it. FM Sync is also used because it supports pop-up fields. PocketCites sets it up such that fields like reference type, year, place of publication, publisher, etc, can use predefined pop-ups, saving time.

Also, PocketCites does a good deal of text processing that wouldn't be possible by creating your own database. It can truncate fields to the proper limits for JFile, and most importantly, it replaces carriage returns within fields so that you won't end up with a messed up import.


An EndNote Library in PocketCites.

PocketCites comes with an installation AppleScript which makes installation a breeze. Once it is set up, and you have to follow the directions very carefully to make sure everything is where it should be. Read the manual carefully and follow the instructions — it takes time but in the ed it is worth it.

PocketCites is a free download here. The cost for the Mac version is $11/$22 with a "sliding scale" for poor students to rich (ahem...) profs. You can use it all you want with just nags about registering, but as always -- support shareware and pay the man: He has worked on this program. We will have more to say about it in a separate review.

Here is the scoop on PocketCites:

Requirements:

  • EndNote 3.0 or greater (previous versions may also work)
  • FileMaker Pro 4.0 or greater
  • FM Sync for JFile (or FM Sync for JFile Pro. Free demo version available from FMSync.)
  • Mac Palm Desktop v 2.0 or greater
  • AppleScript
  • Tanaka's OSAX 2.0 scripting addition, (c) Motoyuki Tanaka (included with PocketCites)


DocumentsToGo

However, it doesn't stop there. While these programs are useful and robust, there is now another solution for Palm-EndNote users: DocumentsToGo by DataViz. This is one fantastic program folks. It allows to create, edit and sync Word, Excel, AppleWorks, the Palm doc, and generic text files. The latest version allows you to also create new documents right on the handheld, as well as edit documents on the handheld. It is a word processor and spreadsheet for the Palm which is Mac friendly. And with DataViz's constant upgrades and improvement (which show they listen to customers very closely), it has a bright future. The latest version 3.003.

DocumentsToGo WordView
DocumentsToGo SheetView

How does this relate to EndNote? It's very easy. Export your Library as as text file, place it in the DocsToGo window for synching, and it ends up on your handheld with the next Sync session. Now open it in DocumentsToGo on the handheld, add references, and sync to the desktop. The synching back is a bit tricky, but DocumentsToGo can help you carry those references Libraries in your palm or pocket. We'll have more to say about this wonderful program in a fuller review. It doesn't do all that PocketCites does, but it is a solution for getting endNote bibliographies into your Palm, with as a spreadsheet of text file.


Conclusion

I have barely scratched the surface here. EndNote is a robust program, and its connectivity, and the availability of Palm solutions, makes it even more handy. Visit the ISI page for more information. For a full feature list see this page. A web presentation can be viewed here.

Documentation. We always like to mention the documentation. EndNote comes with a printed manual. That is good, for we like these better than PDFs or html manuals. It is clearly written and comprehensive, providing not just steps, lessons and tutorials, but it also explains important concepts and terms. With the Index it is 438 pages! Thanks ISI.

As I said, the connectivity is superb and fun (yes, fun!), and scholars can find many uses for it. EndNote 4 is a great upgrade, and a great product for busy teachers and professors. If you are writing a dissertation or thesis, or publish regularly in journals and write books (all the stuff academics do when not teaching), then this program is a must have. If you have a library at home and want a databse of it endnote will save a ton of time.

One thing needs to be noted though: When you select "'Format Bibliography" EndNote is not a speed demon by any stretch of the imagination. This is my biggest complaint. It takes a while in small papers and quite a while in larger papers. Now by "a while" and "quite a while" I do not mean hours, but it can take several minutes. The problems with sharing Libraries, and gaining more control with certain fields would be helpful as well. But considering the time saved anyway, it's something you can put up with. I can't give a full rating because of speed and some of these other minor issues, but it gets 4.5 bites from the Apple just because it has made my life so much easier -- yummy!

Email David Schultz

More Reviews at Applelust.com


Helpful Links

Wooden Brain Concepts (PocketCites, $11/$22 sliding scale)

FMsync (FMSync $39)

Land-J (JFile $25)

DataViz (DocumentsToGo. The upgrade from version 2.0 to 3.0 is $29.95 as of March. Upgrades to 3.003 are free.)

 



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